Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015837106.1_cds_XP_016506543.1_19759
CDS Infomation

[gene=LOC107824309] [db_xref=GeneID:107824309] [protein=ubiquitin carboxyl-terminal hydrolase 22-like] [protein_id=XP_016506543.1] [location=complement(join(76369..77138,78561..78685,79231..80141))] [gbkey=CDS]
Sequence

ATGTCTAGGAACAGTCTTAAGATCCATTTGTCAATCGGTAAGATCCAACCCGGATCCGAA
AATAAAAACGGGTCGCCTGTTTATACCGATAGTGGTACATGCGAGCATTTGTCGGAGCTC
CGATCCAGAGTTGGGTCGAACCCATTTTTCAACTTCCGGGGCTGCGTGAAGGTCCGGCCA
TTGGGGCGTGCGTCCATCCGCCGTGAGCCGCCGAATGAGCTGGTGAGATGTGGTGCGTGC
GGACAGGCGCCGCCGCGGTTGTACGCCTGCGTCACGTGCGCCGCGGTATTCTGCCGTGTG
CACGCGCCGTCGCATCCGGTGGGGAACGCTTCCGATCCCTCGCTGCACAGCATCGCCGTG
GACATCGACAGGGCCGAGCTGTTCTGCTGCGGGTGTAGGGACCAGGTATACGATCGAGAC
TTCGACGCCGCCGTAGTACTAGCGCAGACGGAGGCTACCGTGATCGGATCAATACAAGAC
CCTCCGCCGCAGCCGGAGAACACGCGCAAGAGGAGGCGCGTGGAGTATAAGCCGTGGACG
CCTGATGTGAAAGAGCAGGTCTTGATCGTTGGGAATTCGAGTCCGTTGCCGAGTCAGCTC
GGCAATGACTCAACAACCCCAGAAGTACAATGGGGTTTGAGGGGCCTTAACAATCTTGGA
AACACGTGTTTTATGAATTCAGTGCTTCAAGCATTGCTTCATACACCACCATTGAGGAAT
TACTTTCTGAGTGACAAGCATAACAGATATTTTTGCCAGCGAAAGAATAACAGTGTTATA
ACAAGGAGTAGTAGTGATAATGGGAATAAGAACTCAACAATGCTGTGTTTAGCTTGTGAT
TTGGATGCAATGTTTTCTGCTGTTTTCTCCGGCGATTGGACCCCTATTAGTCCTGCAAAG
TTCCTCTACAGTTGGTGGAAGCATGCATCAAATCTTGCAAGTTATGAACAGCAGGATGCT
CATGAGTTTTTCATTTCCGTGCTTGATGGGATTCATGAAAGGATGCAGAACGATAAAGGA
AAGGCGTTGAGTCCAGGCAGCGGAGACTGTTGCATTGCTCATAGAGTATTTTCTGGGATC
TTGCGGTCTGATGTCATGTGTACAGCTTGTGGCTTCACATCTACTACATATGATCCATGT
ATAGACATCTCCTTGGACTTGGAACTGAGCCAGGGGAGTTCCGCCAAGATGACATCAAAG
AAGTCTCATAATACTCACAAAAAGGAGGCAGAATCTGGAAAGTTTAGCCAAAACGGTCGA
ATTTCTACGTTGATGGGATGCTTAGATCATTTCACAAGACCTGAGAAATTGGGTTCTGAT
CAGAAGTTCTTCTGCCAACATTGTCAAGTGAGACAGGAATCTCTTAAACAGATGTCCATA
AGAAAACTGCCTTTAGTTTCTTGCTTCCATATCAAAAGGTTTGAGCATTCTGTGATTAAG
AAAATGTCAAGGAAGGTTGATCACTACCTACAGTTTCCTTTTTCCTTGGACATGTCGCCT
TATCTCTCTTCATCTATCTTGAGGAGTCGATTTGGAAATAGAATCTTCTCCTTTGACGGG
GACGAGCAAGATGCGTCCTGTGAATCGTCCTCGGAATTTGAGTTGTTTGCTGTCATCACC
CATACTGGTAAACTTGATGCTGGTCATTACGTAACATATCTGAGGTTAAGCAATCAATGG
TACAAATGTGACGATGCCTGGATAACTCAGGTGAGCGAGAGTATTGTGAGAGCTGCGCAA
GGATACATGATGTTTTATGTGCAGAAAATGCTGTATTACAAGGCTAGTGAAAACCAGGTT
AGCTAG

Peptide Sequence

PEP ID

XP_016506543.1
PEP Infomation

PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Nicotiana tabacum]
Sequence

MSRNSLKIHLSIGKIQPGSENKNGSPVYTDSGTCEHLSELRSRVGSNPFFNFRGCVKVRP
LGRASIRREPPNELVRCGACGQAPPRLYACVTCAAVFCRVHAPSHPVGNASDPSLHSIAV
DIDRAELFCCGCRDQVYDRDFDAAVVLAQTEATVIGSIQDPPPQPENTRKRRRVEYKPWT
PDVKEQVLIVGNSSPLPSQLGNDSTTPEVQWGLRGLNNLGNTCFMNSVLQALLHTPPLRN
YFLSDKHNRYFCQRKNNSVITRSSSDNGNKNSTMLCLACDLDAMFSAVFSGDWTPISPAK
FLYSWWKHASNLASYEQQDAHEFFISVLDGIHERMQNDKGKALSPGSGDCCIAHRVFSGI
LRSDVMCTACGFTSTTYDPCIDISLDLELSQGSSAKMTSKKSHNTHKKEAESGKFSQNGR
ISTLMGCLDHFTRPEKLGSDQKFFCQHCQVRQESLKQMSIRKLPLVSCFHIKRFEHSVIK
KMSRKVDHYLQFPFSLDMSPYLSSSILRSRFGNRIFSFDGDEQDASCESSSEFELFAVIT
HTGKLDAGHYVTYLRLSNQWYKCDDAWITQVSESIVRAAQGYMMFYVQKMLYYKASENQV
S

Transcript Sequence

Gene sequence data has not been registered.